Jul 052011
 

Ryan FleacrestToday marks the birthday of one of the most influential and important insect authors; Robert Evans Snodgrass (1875-1962). Snodgrass’ special interest was insect morphology, especially within an evolutionary context, as he sought to not only understand how insects are put together, but also how those structures contributed to the evolutionary history of species. His 1935 opus, Principles of Insect Morphology, is still relevant in many regards (my 4th year Insect Physiology professor referred to it several times throughout the semester), and can be considered one of the most important entomology texts of the 20th century.

Being a morphologist, Snodgrass would be an expert in insect dissection in order to examine the intricacies of insect muscles, nerves and exoskeletons. That being said, I’m sure his techniques were pretty refined and not quite comparable to ripping out the wings of a butterfly, but unfortunately there isn’t a song title “Careful Dissection of the Flight Apparatus of Lepidoptera”, so we’ll stick to some hard rock!

If you’re interested in learning more about PIM (instead of HIM), check out this post by Trichoptera grad student Zach Burington on his excellent blog, Trichopterology!

 

This song is available on iTunes – Wings of a Butterfly – Wings of a Butterfly – Single

Jun 212011
 

Ryan FleacrestIt’s National Pollinator Week in the US, and although Canada doesn’t have their own celebration of insect-facilitated sex, that doesn’t mean I can’t promote some sexy fly pollinators! Honey bees and their hymenopteran brethren get most of the credit for pollination, but flies are likely just as powerful pollinators, only underappreciated and understudied thus far. Some of the world’s most vital crops (i.e. chocolate) depend on flies for pollination (in this case a biting midge of the family Ceratopogonidae), while countless other plants find themselves in a veritable orgy of Diptera deliveries. Some of the more striking of these include the Syrphidae, conveniently known as flower flies for their propensity to visit flowers for pollen and nectar.

Parhelophilus laetus Syrphidae

Parhelophilus laetus

Toxomerus geminatus Syrphidae

Toxomerus geminatus

 

Toxomerus marginatus Syrphidae on flower

Toxomerus marginatus

While these 3 species are pollinators of compound flowers (like the ones in the last photo being visited by Toxomerus marginatus), some flower flies are specialists on plants which were typically thought to be wind pollinated, such as grasses.

Platycheirus sp. Syrphidae on grass

Platycheirus sp.

 

With around 900 species of Syrphidae in North America (and more than 6000 species around the world), not to mention the countless other fly families which visit flowers, there are plenty of flies available to act as plant escorts. You might say that fly pollinators do a little dance of love on behalf of the flowers. I can imagine these fast-flying flower phallus’ bumping and grinding to something a little like this…

 

 

The next time you stop to smell the flowers, don’t forget what it is you’re smelling, the sultry perfume of a flower looking for a little fly action!

 

This song is available on iTunes – Pollinator (Gary Beck Remix) – Global Underground – Tom Novy

If you’d like some more insect sexiness, check out Bug Girl’s excellent, innuendo filled explanation of pollination!

 

 

 

Jun 012011
 

Queen of the Sun movie posterWe’ve heard it repeated in the media before, with varying degrees of alarmism; honey bees are disappearing, and society better repent before we follow them. Termed Colony Collapse Disorder (CCD) in North America, the number of bee colonies which are dying or exiting en mass (swarming) leaving beekeeper’s hives empty has garnered a great deal of attention in the past few years. Of course there’s plenty of evidence that honey bee populations have been in decline for decades and CCD isn’t really a new phenomenon, but sometimes facts just get in the way of a good story, don’ t they?

That’s the way I felt after watching the new documentary Queen of the Sun: What Are The Bees Telling Us? – the production team didn’t want to weigh the audience down with actual evidence for theories proposed by featured beekeepers or even some of the “experts”. That’s not to say I didn’t enjoy the film, I did, I just left feeling that so much more could have been done to educate the audience.

The movie starts off with endless acres of almond trees in California and the bees trucked in from around the USA tasked with pollinating this giant monoculture. From here the film gathers the opinions of some of the most eccentric beekeepers I’ve seen (which is saying something, trust me) on why the bees are disappearing, with some input from “experts”. It was the beekeepers which make this movie worth a watch, and while each and every one of them personifies bees more than I’d like (damn my scientific objectivity), and there is a lot of Gaiaism and Druid religious undertones, meeting and watching these beekeepers work was a lot of fun. Whether it was the bee historian/Yogi who tickles his bees with his impressive mustache or the rooftop apiculturists in London, UK & Brooklyn, New York (where in the former city beekeeping is legal and the latter illegal), the filmmakers found some very interesting people who shared a passion for their hobby/trade.

The majority of the theories on what is causing the decline of the bees comes from the beekeepers with notes thrown in from the chosen “experts”. I’m using the term “expert” loosely, mainly because there were virtually no credentials or explanation about what made each person an “expert” on the topic. Some I recognized, like May Berenbaum from University of Illinois or Scott Black of the Xerces Society and trusted their opinions because of my knowledge of their work. Others, I have no clue why they were consulted; a physicist discussing genetically-modified plants transferring modified bacteria genomes to bees, without mention of why a physicist would be involved with this research or what institute she was associated with? Providing further credentials and background for each expert would allow the audience to make an informed decision on the information provided to them.

Overall, Queen of the Sun was an entertaining movie with some beautiful photography and fantastic people. If you’re looking for a movie which celebrates individuality and passion for apiculture, then this is your movie. If you’re looking for a scientific nature documentary, stick to David Attenborough and the BBC!

 

Jan 282011
 

Today’s special guest blogger is Jess Vickruck, a PhD candidate at Brock University. Jess studies twig nesting bee diversity and the impacts of nest choice on their biology.

When I first started my master’s project, my intention was to look at how nest choice affected fitness in twig nesting carpenter bees (genus Ceratina, family Apidae).  Little did I know that along with twigs full of bee larvae I would also get up close and personal with numerous uninvited house guests who all had one thing in mind – Ceratina are delicious!  Although my supervisor continually reminded me that my thesis was about the bees and not the species that eat bees, I wrote up the data, and lucky for me it appears in the 2010 edition of the Journal of the Entomological Society of Ontario.

Continue reading »

Jan 052011
 

Back in August, while at the International Congress of Dipterology in Costa Rica, I reported on a new species identification technique using some pretty sophisticated technology (i.e. a black piece of paper). The study was published today in PNAS (open access), so I thought I’d revisit it in more detail as our cool science of the week!

Shevtsova et al., Fig. G, 2011

Fig. G from Shevtsova et al., 2011

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Dec 022010
 

Milky Way Galaxy over the jungles of Costa RicaNASA has called a big news conference for this afternoon to discuss a new discovery in the field of Astrobiology (the science of extraterrestrial life) for this afternoon at 2pm. Leaked stories are reporting that NASA scientists have discovered a new life form in Mono Lake, California. Reportedly this life form is arsenic-based, unlike every other animal, plant, fungi and bacteria on the planet which is phosphorous-based. Tune in here to watch along.

The implications of such a find are beyond huge, if true! Does this mean life on Earth has arisen twice in 2 totally different ways (take that ecology and niche partitioning)? Is it extraterrestrial seeding (is the truth really out there)? Either way, phylogenetics and the taxonomic structure as we currently know it (Domain, Kingdom, Phylum, etc) has no room for independently derived life forms, necessitating an entirely new and parallel taxonomic lineage. Not to mention the fact that if it’s happened here there is no reason to assume that it hasn’t happened someplace else in the universe!

I’ll be live-blogging throughout the news conference and trying to provide insights into what this means for taxonomy and science in general. Stay tuned as the world learns of this new life! I encourage everyone to join the discussion below in the comments! Until then, live long and prosper and let the force be with you! (You knew the geek quotes were coming at some point didn’t you?)

Update (1:30pm, Dec 2, 2010): The cat’s out of the bag, and it’s certainly not the white tiger it was made out to be. While the early media reports I read ranged from the extremes of NASA actually finding life on other planets to the story I reported above, in actuality researchers did not discover a new arsenic-based life form, but rather forced an extremo-phile bacteria from Mono Lake to survive on arsenic rather than phosphorous. Even then there are conflicting reports on how much arsenic the bacteria are actually incorporating into their biochemistry. Needless to say I’m fairly disappointed, but I’ll leave that for a more in depth discussion later this afternoon. I’ll still be reading the paper and watching the news conference in case there is something interesting to report, but don’t expect a new taxonomic hierarchy this week!

Update (2:30pm, Dec 2, 2010): Well, that confirms it. The bacterial strain in question (GFAJ-1) was found to live in the mud of Mono Lake, where the concentration of arsenic is higher than most other aquatic habitats, and the researchers decided to see how far they can push the bacterium’s flexibility in accepting arsenic. By slowly weaning bacterium cultures from high phosphorous-content growth medium to low phosphorous-content they found the bacteria could survive and incorporate arsenic into the different cellular and molecular components necessary for life (nucleic acids, proteins, etc).

Update (2:35pm, Dec 2, 2010): I’m going to be candid here, and point out that the lead researcher, Felisa Wolfe-Simon, is coming across as really condescending. I imagine she’s trying to relate her results in a way that laypeople can easily understand (including referring to these bacteria as “bugs”… science fail) but her inflection and attitude is coming across as condescending in my mind.

Update (2:45pm, Dec 2, 2010): They’ve brought a phosphorous expert in who is going on and on about the potential for using arsenic-based life forms to solve the impending phosphorous shortages caused by the agricultural revolution. Not sure how he expects to incorporate arsenic-laden plants into our diet, seeing as it’s extremely toxic as repeatedly stated throughout the news conference. That’s also assuming that you could get non-arsenic adapted plants to accept it in the first place (remember, toxic).

Update (2:50pm, Dec 2, 2010): That was patriotic. She just made clear that all this research was done by Americans, on American soil, and using American dollars. I wonder if she’s worried about US congress criticizing her work on astrobiology like ant workers were criticized for working on ants from outside of the US of A!

Update (3:00pm, Dec 2, 2010): I believe it was USA Today that just phoned in and called out the research team of over-hyping their research and the reaction of the readers looking for proof of alternate life or aliens! I’ve got to agree with them on that (and I’ll bring that up when this circus is over). The researcher’s reply even included a plot line from Star Trek to explain how, although they didn’t find aliens, they now have more options when searching for life.

Final Update and Opinions: That brings this underwhelming scientific discovery to a close. When I first came across the story this morning, I was in awe that perhaps we’d have definitive proof of independently evolved life (whether native to Earth or elsewhere) and all of the implications I outlined originally. As more and more of the research was made available however, I couldn’t help but become frustrated and disappointed, not only with the media (which I expect to sensationalize news to garner attention), but especially with the scientists who allowed and, in some sense, promoted this wild speculation to increase their exposure. Is it any wonder that a large portion of the general public is dubious of science and it’s “wild” and “exaggerated” claims on climate change, extinctions, and now life? Perhaps it’s because I come from a scientific field that is largely ignored by the populace, but grandstanding with big claims and minor results seems like a waste of everyone’s time. Sure there are pressures on young researchers to establish a reputation for themselves, but at who’s expense? Their colleagues? The media? Or worst of all, the public? I’m of the firm belief that your science should speak for itself, without needing to resort to wild media campaigns, vague releases promising big results, or the fall back of “this has so much future potential”.

With that rant aside, I do think that this research is exciting (in a different way than originally), especially if they are able to back up their claims on the full integration of arsenic into biological systems. I’ve long been a believer that there is life in the universe beyond Earth, and have always been confused by astrobiologists saying that finding the exact conditions believed to be necessary for life (oxygen, phosphorous, liquid water, etc) are like a needle in a haystack. Why can’t something evolve to exploit a silicon environment where the mean daily temperature is 100°C? It’s often said that nature abhors a vacuum, so why provide limits on what conditions you believe are required for life to survive? This research lays the groundwork that these alternate hypotheses on the origins of life are feasible and that although alien life is still a matter for science fiction, the day is quickly approaching when we’ll be able to accept an independently evolved life form as scientific fact.

Nov 052010
 
I’d like to welcome Adam Brunke to Biodiversity in Focus as a special guest blogger today. Adam is a graduate student at the University of Guelph, and studies the diversity and agroecology of rove beetles (Staphylinidae) in Ontario.

North America’s insect fauna is changing rapidly. Many of us, however, are completely unaware of this: flies still land on our food, mosquitoes continue to feed on us and carpenter ants show up every year in our kitchens looking for something to eat. The truth is, something strange is happening to the insect communities in our backyards. So many foreign invaders have become established on this continent that it’s becoming a challenge in some places to find native species. In my experience this is especially apparent for beetles: firstly because there are so many exotic species here now; secondly because this is the group that I specialize in. If you casually surveyed your neighborhood for beetles, and sent the sample 100 years into the past to a taxonomist working in North America, they would probably complement you on your excellent reference collection of European Coleoptera!

Xantholinus elegans by Dave Cheung Staphylinidae Insect Beetle

Photo by Dave K.B. Cheung

Continue reading »

Oct 242010
 

Well, October is all but finished, and I can hardly believe where the time has gone. Well, I know where the last week has gone at least, and that’s been busy transcribing old Hennig papers in German. This is one of the greatest challenges to the science of taxonomy in my mind, needing to critically review all prior information on the taxa of interest. Getting the papers in the first place is often an issue, especially when they’re published in obscure journals from the 1800’s, but once you have them, the real work begins trying to decipher the text. Not only is the obvious language barrier standing in the way, but also the obscure entomological terms that most translators can’t catch and, with the older papers, old lexicon which also isn’t always easily translated. With that in mind, I thought I’d share some of the resources I use for translating these papers (from languages including French, German, Portugese and Spanish).

Google Translate Logo

As with most things on the internet these days, Google is my first choice, and in this case, Google Translate. I’ve found that the translations from Google are much better (when reading the results back in English, not doing a direct translation comparison) than say Yahoo’s Babel Fish (is there a trend here between search engine popularity and translation success? Hmmmm…). Even some complicated German compound words are easily readable after a quick run through Google Translate. Other pros for Google? Real-time translation, allowing you to break up those long compound words which confound the software, and the ability to upload entire Word documents to be translated at once. I find typing accented letters in a word processor much easier than online, speeding up the process in many cases (and also allowing you to save your transcribed files for later instead of evapourating into the ether of the web). I’d say that 95% of my translating needs are met with Google Translate. Another added benefit? Google recently added Latin translation, allowing you to check the etymology of taxon names, or invent your own!

Woxicon Free Online Dictionary

Sometimes when you read over your translated text, you’ll come across a word or term that doesn’t seem to fit or make sense. In these cases I turn to the Woxikon Online Dictionary, which provides a list of synonyms for translated words. This website is only for individual words and not mass blocks of text, but it has helped me make sense of some rather odd sentences! Woxicon works for a bevy of languages (although not as extensive as Google) covering most of the languages in classic taxonomic papers.

Of course, neither of these sites are much good with detailed morphological terms, although in many instances I find I can guess the correct structure based on similarity to English, or by comparing to specimens (i.e. looking for the red sclerite on the thorax, and then determining that was the katepisternum).

Now my question to all you taxonomists (and anyone else dealing with similar linguistics issues): how do you go about translating papers? Do you have access to a multi-lingual colleague in your department, speak multiple languages yourself, or have other resources for this sort of thing? Leave your solutions below in the comments!

UPDATE: After finally finishing transcribing Hennig, I found that Google Translate had some issues translating the entire document (26 pages) and took a few tries to translate the whole thing. After finally getting everything translated, I found I couldn’t download the text, and copy & pasting resulted in both the English and German versions getting transferred in a mixed format. The solution? I uploaded my Word document to Google Docs, used the translation service (again needing 3 tries to perform the entire translation) and then downloaded the file back to my computer for reading later. Overall, easy to do (other than the need to translate it multiple times) and with pretty decent results.

Oct 152010
 

Empididae dance fly on green leaf with water droplets

Water, water everywhere, and not a fly in sight! Well, not actually, because the vast majority of flies could be considered aquatics. I’m not just talking about those flies that actually are aquatic at some stage of their life (like chironomid midge larvae, or black fly larvae; I’ll discuss them later), but rather how even those considered “terrestrial” require extremely moist habitats. Take for example, larve of the Xylophagidae, which in North America live in the humidor of rotting bark on downed trees. Or fruit flies (both the true fruit flies {Tephritidae} and the household “Drosophila” melanogaster), which develop in live fruits, stems, flower heads, and leaves for the former, and rotting fruits in the latter. A decaying body is a wet place, and harbours plenty of maggots, usually of Calliphoridae. A live body is also a wet place, and can be colonized by a number of families (termed myiasis) including the infamous bot fly (Oestridae). In fact, very few flies come to mind that don’t spend at least a part of their life in a humid/moist/wet environment.

Besides the vast diversity of “aquatic” flies, flies that are truly aquatic as larvae have been found to be important bioindicators of the health of their watery homes. Phantom midges (Chaoboridae) and their larvae have been used to monitor heavy metals such as nickel in northern Ontario lakes. Black fly larval diversity and species composition has been used to evaluate the health of rivers, especially in northern Canada (imagine that field work, ouch).

Finally, there are some flies which defy convention and dive headlong into the water (skip to 4:40 to see the flies, taken from The Future is Wild series):